NLM’s PubMed Clinical Queries’ Study Category Search Filter Options

One of the multiple ways available for searching PubMed is via the PubMed Clinical Queries search interface which offers three ways to filter your resulting citations. Search results are grouped as follows: 1) Clinical Study Categories, 2) Systematic Reviews, and 3) Medical Genetics.

The Clinical Study Categories option is meant to be used by busy clinicians in order to assist them with retrieving clinically relevant, methodologically sound studies that they can use to inform their clinical decision-making. The five categories (or methodological study types) available include: 1) Etiology, 2) Diagnosis, 3) Therapy (which is the default selection), 4) Prognosis, and 5) Clinical prediction guides. Users can also filter their results by scope: a search strategy can be limited to either a broader, more sensitive search that will return a larger number of results or to a narrower, more specific search that will return fewer results that are more precise.  These Clinical Study Categories search filters or “canned searches” are based on the research of Dr. RB Haynes and his bioinformatics colleagues from McMaster University in Canada, and have been updated and re-validated over the years. Continue reading

Searching for Statistics and Numerical Data

When you are trying to locate statistical and numerical data, spending some time upfront familiarizing yourself with statistical resources and defining your need can save you a lot of time as it will help you determine what data sources are logical choices to consider consulting. The MSK Library’s Cancer Statistics LibGuide is a great place to start your search for statistics as it describes many cancer-related data resources and will help you become aware of your available options.

Here are three key questions you should ask to help define your data need:

  1. What form of data are you looking for? (Are you looking for summarized data or datasets that you plan to analyze yourself?)
  2. What geographical region are you interested in? (Are you interested in local, state, national, or international statistics?)
  3. How recent is the data you are looking for? (Are you looking for data from 10 years ago, 2 years ago, last year, or last month?) Continue reading

Drug Adverse Event Searching Made Easier By MEDLINE and EMBASE Indexing

Similar to MEDLINE (PubMed), EMBASE (owned by Elsevier) is a biomedical database that indexes over 8600 journals from around the World and adds controlled vocabulary or index terms to all of its article citations. Unlike MEDLINE, however, EMBASE also indexes conference proceedings from over 5600 conferences and it uses the Emtree thesaurus instead of MeSH (Medical Subject Headings).

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